Identification Of Biomarkers For Colorectal Cancer From Malaysian Patients

Colorectal cancer (CRC) is on the rise. However, biomarkers for indication of CRC progression is still lacking despite several advances in proteomic and microarray tools. This study aims to identify potential biomarkers for the diagnosis of CRC among Malaysian patients. In this study, sequential...

पूर्ण विवरण

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मुख्य लेखक: Yeoh, Lay Chin
स्वरूप: थीसिस
भाषा:अंग्रेज़ी
प्रकाशित: 2010
विषय:
ऑनलाइन पहुंच:http://eprints.usm.my/42493/
Abstract Abstract here
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author Yeoh, Lay Chin
author_facet Yeoh, Lay Chin
author_sort Yeoh, Lay Chin
description Colorectal cancer (CRC) is on the rise. However, biomarkers for indication of CRC progression is still lacking despite several advances in proteomic and microarray tools. This study aims to identify potential biomarkers for the diagnosis of CRC among Malaysian patients. In this study, sequential extraction was first performed using Tris buffer followed by TLB buffer in order to reduce the complexity of the CRC proteome. The tissues used were surgical resections of normal mucosa and cancerous tissues from 26 CRC patients. The extracted proteins were separated by 2D gel electrophoresis. The differentially expressed protein spots were then mapped for further protein identification by the use of liquid chromatography tandem mass spectrometry (LC-MS/MS). We have identified 37 hydrophilic proteins in the Tris extracts and 24 hydrophobic proteins in the thiourea lysis buffer (TLB) extracts from the samples collected. Leukocyte elastase inhibitor (LEI) and 60 kDa heat shock protein (HSP60) were the potential biomarkers for CRC analyzed from the Tris extracts whereas triosephosphate isomerase (TPI) and annexin A3 were the potential biomarkers for CRC analyzed from the TLB extracts. Moreover, LEI was the potential biomarker for CRC patients at stage III in combination with either moderately differentiated adenocarcinoma (MDA), well differentiated adenocarcinoma (WDA) or lymph node metastasis CRC.
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spelling usm-424932019-04-12T05:26:52Z http://eprints.usm.my/42493/ Identification Of Biomarkers For Colorectal Cancer From Malaysian Patients Yeoh, Lay Chin RS1-441 Pharmacy and materia medica Colorectal cancer (CRC) is on the rise. However, biomarkers for indication of CRC progression is still lacking despite several advances in proteomic and microarray tools. This study aims to identify potential biomarkers for the diagnosis of CRC among Malaysian patients. In this study, sequential extraction was first performed using Tris buffer followed by TLB buffer in order to reduce the complexity of the CRC proteome. The tissues used were surgical resections of normal mucosa and cancerous tissues from 26 CRC patients. The extracted proteins were separated by 2D gel electrophoresis. The differentially expressed protein spots were then mapped for further protein identification by the use of liquid chromatography tandem mass spectrometry (LC-MS/MS). We have identified 37 hydrophilic proteins in the Tris extracts and 24 hydrophobic proteins in the thiourea lysis buffer (TLB) extracts from the samples collected. Leukocyte elastase inhibitor (LEI) and 60 kDa heat shock protein (HSP60) were the potential biomarkers for CRC analyzed from the Tris extracts whereas triosephosphate isomerase (TPI) and annexin A3 were the potential biomarkers for CRC analyzed from the TLB extracts. Moreover, LEI was the potential biomarker for CRC patients at stage III in combination with either moderately differentiated adenocarcinoma (MDA), well differentiated adenocarcinoma (WDA) or lymph node metastasis CRC. 2010-06 Thesis NonPeerReviewed application/pdf en http://eprints.usm.my/42493/1/YEOH_LAY_CHIN_HJ.pdf Yeoh, Lay Chin (2010) Identification Of Biomarkers For Colorectal Cancer From Malaysian Patients. Masters thesis, Universiti Sains Malaysia.
spellingShingle RS1-441 Pharmacy and materia medica
Yeoh, Lay Chin
Identification Of Biomarkers For Colorectal Cancer From Malaysian Patients
title Identification Of Biomarkers For Colorectal Cancer From Malaysian Patients
title_full Identification Of Biomarkers For Colorectal Cancer From Malaysian Patients
title_fullStr Identification Of Biomarkers For Colorectal Cancer From Malaysian Patients
title_full_unstemmed Identification Of Biomarkers For Colorectal Cancer From Malaysian Patients
title_short Identification Of Biomarkers For Colorectal Cancer From Malaysian Patients
title_sort identification of biomarkers for colorectal cancer from malaysian patients
topic RS1-441 Pharmacy and materia medica
url http://eprints.usm.my/42493/
work_keys_str_mv AT yeohlaychin identificationofbiomarkersforcolorectalcancerfrommalaysianpatients